From 6fab8cd3b6fe42caf501751221f4c4429fb35c01 Mon Sep 17 00:00:00 2001 From: "renovate[bot]" <29139614+renovate[bot]@users.noreply.github.com> Date: Tue, 27 Oct 2026 19:33:00 +0000 Subject: [PATCH] chore(deps): update repository maintenance --- .github/workflows/create_github_release.yaml | 4 ++-- .github/workflows/draft-paper.yaml | 4 ++-- .github/workflows/github_release.yml | 4 ++-- .github/workflows/pkgdown.yml | 6 +++--- .github/workflows/rworkflows.yml | 2 +- .github/workflows/test-coverage.yaml | 6 +++--- .github/workflows/test-coverage.yml | 6 +++--- 7 files changed, 16 insertions(+), 16 deletions(-) diff --git a/.github/workflows/create_github_release.yaml b/.github/workflows/create_github_release.yaml index 64500d4..129ba35 100644 --- a/.github/workflows/create_github_release.yaml +++ b/.github/workflows/create_github_release.yaml @@ -48,13 +48,13 @@ jobs: libharfbuzz-dev libfribidi-dev \ pandoc - name: Setup R - uses: r-lib/actions/setup-r@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-r@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 with: r-version: ${{ matrix.r_version }} use-public-rspm: true id: r - name: Install dependencies - uses: r-lib/actions/setup-renv@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-renv@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 - name: Build Package run: R CMD build . - name: Rename Package diff --git a/.github/workflows/draft-paper.yaml b/.github/workflows/draft-paper.yaml index b988418..544d081 100644 --- a/.github/workflows/draft-paper.yaml +++ b/.github/workflows/draft-paper.yaml @@ -13,13 +13,13 @@ jobs: - name: Checkout uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7 - name: Build draft PDF - uses: openjournals/openjournals-draft-action@master + uses: openjournals/openjournals-draft-action@af22ceb4b8f9eff6b3a13c05747ccc2f573cf2e6 # master with: journal: joss # This should be the path to the paper within your repo. paper-path: joss/paper.md - name: Upload - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7 with: name: paper # This is the output path where Pandoc will write the compiled diff --git a/.github/workflows/github_release.yml b/.github/workflows/github_release.yml index ef0e96c..672047c 100644 --- a/.github/workflows/github_release.yml +++ b/.github/workflows/github_release.yml @@ -56,13 +56,13 @@ jobs: libudunits2-dev libharfbuzz-dev libfribidi-dev \ pandoc - name: Setup R - uses: r-lib/actions/setup-r@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-r@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 with: r-version: ${{ matrix.r_version }} use-public-rspm: true id: r - name: Install dependencies - uses: r-lib/actions/setup-renv@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-renv@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 - name: Build Package run: R CMD build . - name: Rename Package diff --git a/.github/workflows/pkgdown.yml b/.github/workflows/pkgdown.yml index f05cc90..1325be9 100644 --- a/.github/workflows/pkgdown.yml +++ b/.github/workflows/pkgdown.yml @@ -21,7 +21,7 @@ jobs: - name: Checkout uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 - name: Setup R - uses: r-lib/actions/setup-r@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-r@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 with: r-version: renv - name: Install system dependencies @@ -33,7 +33,7 @@ jobs: libudunits2-dev libharfbuzz-dev libfribidi-dev \ pandoc - name: Install dependencies - uses: r-lib/actions/setup-renv@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + uses: r-lib/actions/setup-renv@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 - name: Build pkgdown site run: Rscript -e 'pkgdown::build_site_github_pages(install = TRUE)' - name: Deploy pkgdown site @@ -41,6 +41,6 @@ jobs: with: path: docs/ - name: Deploy pkgdown site - uses: actions/deploy-pages@cd2ce8fcbc39b97be8ca5fce6e763baed58fa128 # v5.0.0 + uses: actions/deploy-pages@368f82528645a54fb793d4d04e342629a3f51346 # v5.0.1 with: token: ${{ secrets.GITHUB_TOKEN }} diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml index 563c12b..e320594 100644 --- a/.github/workflows/rworkflows.yml +++ b/.github/workflows/rworkflows.yml @@ -39,7 +39,7 @@ jobs: bioc: devel r: auto steps: - - uses: neurogenomics/rworkflows@master + - uses: neurogenomics/rworkflows@ea16aa1b6e5a8608572eb38f734858b865c87f4b # master with: run_bioccheck: ${{ false }} run_rcmdcheck: ${{ true }} diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml index e47c9a9..ca2c10e 100644 --- a/.github/workflows/test-coverage.yaml +++ b/.github/workflows/test-coverage.yaml @@ -17,11 +17,11 @@ jobs: steps: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7 - - uses: r-lib/actions/setup-r@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2 + - uses: r-lib/actions/setup-r@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2 with: use-public-rspm: true - - uses: r-lib/actions/setup-r-dependencies@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2 + - uses: r-lib/actions/setup-r-dependencies@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2 with: extra-packages: any::covr needs: coverage @@ -44,7 +44,7 @@ jobs: - name: Upload test results if: always() - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7 with: name: coverage-test-failures path: ${{ runner.temp }}/package diff --git a/.github/workflows/test-coverage.yml b/.github/workflows/test-coverage.yml index 24eaa6f..8774203 100644 --- a/.github/workflows/test-coverage.yml +++ b/.github/workflows/test-coverage.yml @@ -23,11 +23,11 @@ jobs: steps: - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 - - uses: r-lib/actions/setup-r@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + - uses: r-lib/actions/setup-r@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 with: use-public-rspm: true - - uses: r-lib/actions/setup-r-dependencies@6f6e5bc62fba3a704f74e7ad7ef7676c5c6a2590 # v2.11.4 + - uses: r-lib/actions/setup-r-dependencies@f9a764fea8d5c63df6ef9a5c7795bf7deb5d7e05 # v2.14.0 with: extra-packages: any::covr needs: coverage @@ -52,7 +52,7 @@ jobs: - name: Upload test results if: always() - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2 with: name: coverage-test-failures path: ${{ runner.temp }}/package