Incompatible packages

[HamzaMbareche]

I am having an error while running cap2 run pipeline:

Found conflicts! Looking for incompatible packages.
This can take several minutes. Press CTRL-C to abort.
failed                                                                                                                                                                             

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

Package libzlib conflicts for:
python=3.9 -> libzlib[version='>=1.2.11,<1.3.0a0']
python=3.9 -> zlib[version='>=1.2.11,<1.3.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12',build='h166bdaf_1014|h166bdaf_0|h36c2ea0_1013|h36c2ea0_1012']

Package ncurses conflicts for:
python=3.9 -> readline[version='>=8.0,<9.0a0'] -> ncurses[version='>=6.1,<7.0.0a0|>=6.1,<7.0a0']
python=3.9 -> ncurses[version='>=6.2,<7.0.0a0|>=6.3,<7.0a0|>=6.2,<7.0a0']

Package libgcc-ng conflicts for:
python=3.9 -> zlib[version='>=1.2.11,<1.3.0a0'] -> libgcc-ng[version='>=4.9|>=7.2.0']
python=3.9 -> libgcc-ng[version='>=10.3.0|>=12|>=7.5.0|>=9.4.0|>=9.3.0|>=7.3.0']

Package libstdcxx-ng conflicts for:
python=3.9 -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0']
python=3.9 -> libffi[version='>=3.4.2,<3.5.0a0'] -> libstdcxx-ng[version='>=4.9|>=9.4.0|>=7.2.0']

Package zlib conflicts for:
samtools=1.09 -> zlib[version='>=1.2.11,<1.3.0a0']
samtools=1.09 -> curl[version='>=7.59.0,<8.0a0'] -> zlib==1.2.11
python=3.9 -> zlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0']The following specifications were found to be incompatible with your system:

  - feature:/linux-64::__glibc==2.31=0
  - feature:|@/linux-64::__glibc==2.31=0
  - samtools=1.09 -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']

Your installed version is: 2.31

I am running the pipeline on ubuntu 20.04. It looks like some of the libraries are not compatible with my system. Is there a way to work around this?

Thanks,
Hamza