Issues

• Assuming isotropic voxel everywhere

  scilus/scilpy#1353 · Filter by author frheault opened on Sep 12, 2026

• scil_tracking_local invalid .tck output

  Bug

  scilus/scilpy#1340 · Filter by author CHrlS98 opened on Jun 17, 2026

• bundleseg: invalid streamlines verification

  scilus/scilpy#1322 · Filter by author EmmaRenauld opened on Apr 1, 2026

• NODDI priors_ventricles mask

  scilus/scilpy#1313 · Filter by author Joanasousa03 opened on Feb 26, 2026
  2

• scilpy - non RAS stride

  scilus/scilpy#1294 · Filter by author arnaudbore opened on Jan 6, 2026
  

• scil_dti_metrics should check for shell validity

  scilus/scilpy#1284 · Filter by author AlexVCaron opened on Nov 27, 2025
  1

• TODO list for tutorials

  scilus/scilpy#1274 · Filter by author EmmaRenauld opened on Nov 4, 2025

• Misleading warning for reference

  scilus/scilpy#1218 · Filter by author EmmaRenauld opened on Aug 28, 2025
  1

  

• toDo: Possible improvements to viz scripts

  scilus/scilpy#1207 · Filter by author EmmaRenauld opened on Jul 30, 2025
  1

  

• toDo: Add peaks as test data

  scilus/scilpy#1203 · Filter by author EmmaRenauld opened on Jul 23, 2025
  1

  

• ISMRM2015 scoring script

  scilus/scilpy#1153 · Filter by author levje opened on Apr 5, 2025
  3

  

• Unexpected FOD Orientation in scil_tracking_local with ISMRM-computed FOD

  scilus/scilpy#1146 · Filter by author tensor2023 opened on Mar 12, 2025
  1

• Set float precision on output jsons

  scilus/scilpy#1144 · Filter by author AlexVCaron opened on Mar 4, 2025
  

• ENH: improve bundles QC by slicing 3 background planes at the center of mass of the bundle.

  scilus/scilpy#1140 · Filter by author bpinsard opened on Feb 7, 2025

• update scilpy: remove old stuff now in dipy

  scilus/scilpy#1120 · Filter by author arnaudbore opened on Jan 16, 2025
  1

  

• [New feature] Topup configuration selection

  enhancement
  scilus/scilpy#1111 · Filter by author AlexVCaron opened on Dec 17, 2024

• Using fixtures in tests

  scilus/scilpy#1104 · Filter by author levje opened on Dec 12, 2024

• IO fetcher

  Hackathon-Senior
  scilus/scilpy#1095 · Filter by author arnaudbore opened on Dec 12, 2024
  

• scil_surface_convert.py only supports FreeSurfer surfaces, update this script to support FSL first subcortical segmentations

  Hackathon-Senior
  scilus/scilpy#1071 · Filter by author grahamlittlephd opened on Dec 5, 2024
  

• Invalid help

  Hackathon-Senior
  scilus/scilpy#1061 · Filter by author EmmaRenauld opened on Nov 29, 2024
  1

• Division by 0

  Hackathon-Senior
  scilus/scilpy#1054 · Filter by author EmmaRenauld opened on Nov 21, 2024
  3

  

• New scripts suggestions or new features

  Hackathon-Senior
  scilus/scilpy#1049 · Filter by author arnaudbore opened on Nov 8, 2024
  1

  

• Add header info when saving into nifti

  Hackathon - Junior
  scilus/scilpy#1038 · Filter by author arnaudbore opened on Oct 24, 2024
  1

• freewater estimation

  scilus/scilpy#1029 · Filter by author raywell627 opened on Sep 23, 2024
  1

• Some issues with dps and dpp

  Hackathon-Senior
  scilus/scilpy#1008 · Filter by author arnaudbore opened on Jul 2, 2024