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chore(legacy): remove agent and system files from imported snapshots - #44

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4444J99 merged 1 commit into
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cleanup/agent-files-linguistic-atomization-framework-20261105
Nov 5, 2026
Merged

4444J99 merged 1 commit into
mainfrom
cleanup/agent-files-linguistic-atomization-framework-20261105

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@4444J99

@4444J99 4444J99 commented Nov 5, 2026 •

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Removes agent-instruction and system files from the imported legacy snapshot(s) in this repo (legacy/nexus--babel-alexandria): 15 files in total.

Owner decision 2026-11-05: strip them, matching the publication standard in docs/audits/2026-11-05-private-repo-publication-assessment.md (corpus repo). The files stay in the archived private sources; earlier commits here still contain them. The two nexus PDFs are not touched.

🤖 Generated with Claude Code

Summary by Sourcery

Sanitize the imported legacy snapshot for publication while preserving the archived private source and existing historical commits.

Enhancements:

  • Remove agent-instruction, system, and related configuration files from the imported legacy snapshot to meet the publication standard.

Documentation:

  • Record the snapshot cleanup and its publication rationale in PROVENANCE.md.

Summary by CodeRabbit

  • Chores
    • Removed project guidance, support and security policies, and repository metadata from the archived snapshot.
    • Removed automated CI checks and dependency update configuration; those workflows are no longer defined in this snapshot.
  • Documentation
    • Updated the provenance record to note the cleanup and that the removed materials remain in the private archive and earlier commits.

Removes AGENTS.md, CLAUDE.md, GEMINI.md, seed.yaml, ecosystem.yaml, network-map.yaml, value-repos.json and the .claude/.codex/.gemini/.conductor/.github/ecosystem folders from the imported legacy snapshots, per the owner's publication standard. They stay in the archived private sources.

Co-Authored-By: Claude Sonnet 5.5 <noreply@anthropic.com>
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sourcery-ai Bot commented Nov 5, 2026

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Sorry @4444J99, you've used your own review budget of 250,000 diff characters for the last 7 days.

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sourcery-ai Bot commented Nov 5, 2026

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Reviewer's guide (collapsed on small PRs)

Reviewer's Guide

This PR sanitizes the imported legacy snapshot for public publication by deleting 15 agent-instruction, system, ecosystem, and GitHub control files, while preserving the nexus PDFs and documenting the cleanup, source retention, and historical-commit caveats in PROVENANCE.md.

File-Level Changes

Change Details Files
Remove publication-sensitive agent, system, and repository-control files from the imported legacy snapshot.
  • Delete root-level instruction and metadata files, including AGENTS.md, CLAUDE.md, GEMINI.md, seed.yaml, ecosystem.yaml, network-map.yaml, and value-repos.json.
  • Delete the ecosystem metadata subtree containing pillar DNA and delivery configuration.
  • Delete the .github instruction, policy, dependency-update, and CI files.
  • Leave the two nexus PDFs untouched.
legacy/nexus--babel-alexandria/.github/AGENTS.md
legacy/nexus--babel-alexandria/.github/GEMINI.md
legacy/nexus--babel-alexandria/.github/SECURITY.md
legacy/nexus--babel-alexandria/.github/SUPPORT.md
legacy/nexus--babel-alexandria/.github/dependabot.yml
legacy/nexus--babel-alexandria/.github/workflows/ci-minimal.yml
legacy/nexus--babel-alexandria/AGENTS.md
legacy/nexus--babel-alexandria/CLAUDE.md
legacy/nexus--babel-alexandria/GEMINI.md
legacy/nexus--babel-alexandria/ecosystem.yaml
legacy/nexus--babel-alexandria/ecosystem/pillar-dna/content.yaml
legacy/nexus--babel-alexandria/ecosystem/pillar-dna/delivery.yaml
legacy/nexus--babel-alexandria/network-map.yaml
legacy/nexus--babel-alexandria/seed.yaml
legacy/nexus--babel-alexandria/value-repos.json
Document the snapshot cleanup and its retention policy in provenance metadata.
  • Add a dated cleanup section describing the removed file categories and directories.
  • Record that the files remain in archived private sources and earlier repository commits.
legacy/nexus--babel-alexandria/PROVENANCE.md

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@coderabbitai

coderabbitai Bot commented Nov 5, 2026 •

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Explain Change →

Caution

Review failed

The pull request is closed.

Walkthrough

The pull request removes agent guidance, project documentation, GitHub policies and automation, and ecosystem records from the legacy repository snapshot. It adds a provenance note that identifies the removed materials as archived and present in earlier commits.

Changes: Legacy repository snapshot cleanup

Layer / File(s) Summary
GitHub policies and automation
.github/SECURITY.md, .github/SUPPORT.md, .github/dependabot.yml, .github/workflows/ci-minimal.yml
The security and support guides, Dependabot configuration, and CI workflow are removed.
Agent and project guidance
AGENTS.md, GEMINI.md, CLAUDE.md, .github/AGENTS.md, .github/GEMINI.md
The agent context and project guidance files are removed.
Ecosystem records and provenance
ecosystem.yaml, ecosystem/pillar-dna/*, network-map.yaml, seed.yaml, value-repos.json, PROVENANCE.md
The ecosystem, pillar, network, seed, and value-repository records are removed. PROVENANCE.md adds a cleanup note identifying the archived private source and earlier commits.

Estimated code review effort: 2 (Simple) | ~10 minutes

Change: Other

Merge Risk: Minimal · up to 778d6

The cleanup removes legacy snapshot files and records their archival location. No material merge risk is evident.

- [ ] Autofix · Keep fixing CodeRabbit findings and required CI, and resolving merge conflicts

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@4444J99 4444J99 added the lifecycle:delivery Delivery PR: eligible for the merge rail label Nov 5, 2026
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chatgpt-codex-connector Bot commented Nov 5, 2026 •

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Codex Review Summary

This comment shows the latest Codex review activity on this pull request.

Review Status Commit Review trigger
📝 Code Review ✅ Completed 2026-11-05T21:58:54.322084Z 778d6ab PR opened
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@4444J99
4444J99 merged commit 738e4f3 into main Nov 5, 2026
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