Hi Wai,
All generated VCF files should be compatible with the VCF format 4.1.
In addition I would also filter out all the calls that are below 20bp since they create a lot of noise in the merged VCF and they are beyond our scope of large structural variants.
Cheers
Laurent
Hi Wai,
All generated VCF files should be compatible with the VCF format 4.1.
In addition I would also filter out all the calls that are below 20bp since they create a lot of noise in the merged VCF and they are beyond our scope of large structural variants.
Cheers
Laurent