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1. gnn-kg-for-novel-target-id gnn-kg-for-novel-target-id Public

   Python

2. ai-research-agent ai-research-agent Public

   A small, readable ReAct research agent on Claude for scientific and biomedical data analysis

   Python

3. schema-coercion-bench schema-coercion-bench Public

   Benchmark for automated schema coercion: messy CSV/TSV/XLSX tables to fixed Pydantic schemas

   Python

4. circuit-state circuit-state Public

   studying host-circuit phenotypes, host-circuit control, and circuit cell states

   Jupyter Notebook

5. zero-shot-protein-binders zero-shot-protein-binders Public

   Benchmarking zero-shot LLM classification of protein binders from cofolding metrics against supervised and single-metric baselines

   Jupyter Notebook