Bioinformatics Lab - Department of Computer Science - University Freiburg
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RNA-Playground
RNA-Playground PublicVisualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.
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CRISPRcasIdentifier
CRISPRcasIdentifier PublicMachine learning for accurate identification and classification of CRISPR-Cas systems
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Repositories
- V_RNA-pages Public
- De-novo-design-of-antibacterial-cell-penetrating-peptides-using-structure-aware-generative-modelling Public
model to design cell penetrating proteins
- metabolomic_classifier Public
provides a baseline metabolomic classifier for FI-TWIM-MS and PSI-MS datasets based on the TabPFN framework, together with baselnie methods
- Deep-Generative-modeling-Reveals-Multi-Phase-Regenerative-Cell-Dynamics-in-Arabidopsis-Roots Public
Plant regeneration is a highly orchestrated process characterised by dynamic cellular reprogramming and lineage plasticity. This study presents an integrative deep generative framework to identify and characterise regenerative cell states from scRNA-seq data collected across five post-injury time points
- SV_diagnostic_tool Public
- ML_LS_resources Public
ML in Life Science resources - hands-on lectures, hands-on exercise solutions
- BioinformaticsI-pages Public
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