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Nwgrad - #14

Merged

mciach merged 69 commits into

mainfrom

Oct 7, 2026

Commits on Sep 28, 2026
- nwgrad
  mciach
  committed
  e5d11de
Commits on Sep 29, 2026
- Drop Python <3.13 upper bound; add tests/ package
  michalsta
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  ba1b089
- Add pytest config, test helpers and logit_link unit tests
  michalsta
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  a9af391
- Add unit tests for src.optimization
  michalsta
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  a51a28c
- Add alignment-helper tests and gradient-consistency integration tests
  michalsta
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  7b16624
- Add integration tests for discrimalign()
  michalsta
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  ffbdac8
- Add slow end-to-end learning tests and document running the suite
  michalsta
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  761be7d
- Fix gap open/extend counting when gaps alternate between sequences
  michalsta
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  9ddaaa4
- Raise a clear ValueError when discrimalign() has no stepfunction
  michalsta
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  771dd0f
- Move the small mixed test fixture into tests/helpers.py
  michalsta
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  f2cc46f
- Add nwgrad dependency and parameter/gradient conversion layer
  michalsta
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  9b59f48
Commits on Sep 30, 2026
Commits on Oct 1, 2026
Commits on Oct 2, 2026
Commits on Oct 3, 2026
Commits on Oct 5, 2026
Commits on Oct 7, 2026
- Merge pull request #12 from michalsta/nwgrad-backend
  mciach
  authored
  c7b1c3b