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@CSB-IG

Computational Systems Biology/Integrative Genomics

Computational Systems Biology/Integrative Genomics at National Institute of Genomic Medicine - México

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  1. tmr_search tmr_search Public

    Transcriptional Master Regulator search in Cancer, a pipeline using MARINa

    R 6 3

  2. SGCCA SGCCA Public

    Functional impact of multi-omic interactions in breast cancer subtypes

    HTML 4

  3. sc-RNAseq-pipelines sc-RNAseq-pipelines Public

    Pipelines for single cell RNAseq data analysis

    Python 3 1

  4. literature literature Public

    Data mining, mostly medline. Text mining. Network based analyses.

    Shell 2 10

  5. rnw rnw Public

    regulation network workflow

    R 2 2

  6. miRNAseq_rnw miRNAseq_rnw Public

    miRNAseq regulatory networks

    R 2 1

Repositories

Showing 10 of 64 repositories
  • CSB-IG.github.io Public
    CSB-IG/CSB-IG.github.io's past year of commit activity
    SCSS 1 GPL-3.0 1 0 0 Updated Oct 28, 2026
  • inmegen-biologia-computacional Public

    Repositorio con enlaces a las clases grabadas del curso Fundamentos Matemáticos de la Biología Computacional, disponibles en Vimeo.

    CSB-IG/inmegen-biologia-computacional's past year of commit activity
    0 0 0 0 Updated Apr 21, 2026
  • sigPCA_1.0 Public

    Statistical significance of Principal Component Analysis based on Random Matrix Theory

    CSB-IG/sigPCA_1.0's past year of commit activity
    R 0 0 0 0 Updated Mar 27, 2026
  • TDA_Single_Cell Public

    Code to perform Topological Data Analytics

    CSB-IG/TDA_Single_Cell's past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 4, 2025
  • GSE167150_HiC_networks Public

    Analysis of TNBC Hi-C Networks

    CSB-IG/GSE167150_HiC_networks's past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jul 2, 2025
  • sc-RNAseq-pipelines Public

    Pipelines for single cell RNAseq data analysis

    CSB-IG/sc-RNAseq-pipelines's past year of commit activity
    Python 3 MIT 1 12 0 Updated May 20, 2025
  • FAERS Public Forked from TAKMU/FAERS

    Download files from FAERS, and prepare data to import to a Postgresql DB, and obtain PRR.

    CSB-IG/FAERS's past year of commit activity
    Python 0 1 0 0 Updated Apr 10, 2025
  • EoN-Epidemics-on-Networks- Public

    Modeling epidemic phenomena in dynamic networks

    CSB-IG/EoN-Epidemics-on-Networks-'s past year of commit activity
    Python 1 0 0 0 Updated Apr 3, 2025
  • GSE167150_HiC_matrices Public

    Workflow to run HiC-Pro on TNBC and Contralateral normal samples

    CSB-IG/GSE167150_HiC_matrices's past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 27, 2025
  • FAERS-Antidepressants-ADR Public Forked from TAKMU/FAERS-Antidepressants-ADR

    Repository for code to find ADRs in antidepressants using FAERS. Made with the help of INMEGEN.

    CSB-IG/FAERS-Antidepressants-ADR's past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Feb 27, 2025
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