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Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

Achievements

Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

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@NygenAnalytics @KutumLab

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Gautam8387/README.md

Hi, I am Gautam!

I am a Senior Scientific Computing Engineer at Nygen Analytics, working on AI agents for single-cell genomics. Previously, I worked on biomedical AI at Ashoka University, on clinical language models, medical imaging and knowledge graphs. I studied computer science and mathematics at Ashoka University.

  • Building CyteType and CyteOnto for evidence-based cell-type annotation
  • Contributing to scarf: LLM-agent analysis and Cytebase
  • PRISM, my undergraduate thesis, was accepted at GenAI4Health @ NeurIPS 2025

Links:

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  1. CyteArc CyteArc Public

    Forked from NygenAnalytics/CyteArc

    Python

  2. CyteType CyteType Public

    Forked from NygenAnalytics/CyteType

    Agentic Cell type annotation for Anndata objects

    Python

  3. NygenAnalytics/CyteOnto NygenAnalytics/CyteOnto Public

    Automated semantic comparison of cell type annotations

    Python 6 2

  4. scarf scarf Public

    Forked from NygenAnalytics/scarf

    Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

    Python