Issues

• COAD proteomics download fails for all sources with NoneType // int error

  PayneLab/cptac#80 · Filter by author isaakovakate opened on May 31, 2026
  1

• Transcriptomics Normalization

  PayneLab/cptac#78 · Filter by author shakeel608 opened on Sep 23, 2025

• Definitively map omics patient IDs with sample/aliquot IDs?

  PayneLab/cptac#77 · Filter by author GiantSpaceRobot opened on Aug 29, 2025

• Ov cancer with Transcriptomics and phosphoproteomics.

  PayneLab/cptac#75 · Filter by author Drglazizzo opened on Jun 13, 2025
  1

• How to change the download directory.

  PayneLab/cptac#74 · Filter by author SHhAaNnE opened on Jun 3, 2025

• How to get corresponding Protein IDs

  PayneLab/cptac#73 · Filter by author shakeel608 opened on May 27, 2025

• how to know the sample belong to Tumor or Normal group?

  PayneLab/cptac#72 · Filter by author zihaoxingstudy1 opened on Jan 1, 2025
  1

• Unable to find certain patient data, while they are actually available from the official website.

  PayneLab/cptac#71 · Filter by author pita-the-bestest opened on Dec 18, 2024

• Duplicate peptides in phosphoproteomics data

  PayneLab/cptac#70 · Filter by author LJMHiggins opened on Dec 17, 2024

• tutorial 6 and 7 link broken

  PayneLab/cptac#69 · Filter by author dingying85 opened on Oct 9, 2024
  1

• Module 'cptac' has no attribute 'INDEX'

  PayneLab/cptac#68 · Filter by author mavershang opened on Aug 5, 2024
  3

• cptac package failing on import

  PayneLab/cptac#65 · Filter by author sgosline opened on May 6, 2024

• 429 Client Error: TOO MANY REQUESTS Error

  PayneLab/cptac#64 · Filter by author CCranney opened on Apr 25, 2024
  2

• Proteomics dataframes between "umich" and "bcm"

  PayneLab/cptac#58 · Filter by author sunhuaiyu opened on Jan 11, 2024

• How to best use the protein expression data

  PayneLab/cptac#53 · Filter by author seunghun23 opened on Nov 1, 2023