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@TravisWheelerLab

Wheeler Lab

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  1. nail nail Public

    Nail is an Alignment Inference tooL

    Rust 70 6

  2. BATH BATH Public

    Better Alignments with Translated HMMER

    C 27 6

  3. ULTRA ULTRA Public

    ULTRA Locates Tandemly Repetitive Areas

    C++ 40 5

  4. sufr sufr Public

    Parallel Construction of Suffix Arrays in Rust

    Rust 26 2

  5. DIPLOMAT DIPLOMAT Public

    Deep learning-based Identity Preserving Labeled-Object Multi-Animal Tracking (Beta)

    Python 10 3

  6. NEAR NEAR Public

    Jupyter Notebook 2

Repositories

Showing 10 of 81 repositories
  • conferences Public

    Upcoming conferences & workshops of interest to the Wheeler Lab (bioinformatics, ML for biology, genomics, protein structure).

    TravisWheelerLab/conferences's past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 21, 2026
  • BATH Public

    Better Alignments with Translated HMMER

    TravisWheelerLab/BATH's past year of commit activity
    C 27 6 0 0 Updated Sep 21, 2026
  • mdrepo-rs Public

    MDRepo tools in Rust

    TravisWheelerLab/mdrepo-rs's past year of commit activity
    Rust 0 BSD-3-Clause 1 0 3 Updated Sep 18, 2026
  • easel Public Forked from EddyRivasLab/easel

    Sequence analysis library used by Eddy/Rivas lab code

    TravisWheelerLab/easel's past year of commit activity
    C 0 31 0 0 Updated Sep 18, 2026
  • nail-benchmarks Public

    A collection of reproducible benchmarks for nail

    TravisWheelerLab/nail-benchmarks's past year of commit activity
    Python 0 0 0 0 Updated Sep 18, 2026
  • sufr Public

    Parallel Construction of Suffix Arrays in Rust

    TravisWheelerLab/sufr's past year of commit activity
    Rust 26 BSD-3-Clause 2 3 1 Updated Sep 17, 2026
  • nail Public

    Nail is an Alignment Inference tooL

    TravisWheelerLab/nail's past year of commit activity
    Rust 70 BSD-3-Clause 6 0 0 Updated Sep 17, 2026
  • ninja Public

    NINJA: large-scale neighbor-joining phylogeny inference (Rust)

    TravisWheelerLab/ninja's past year of commit activity
    Rust 0 BSD-3-Clause 0 0 0 Updated Sep 17, 2026
  • aurora Public
    TravisWheelerLab/aurora's past year of commit activity
    Rust 2 BSD-3-Clause 0 0 0 Updated Sep 11, 2026
  • mdrepo-readthedocs Public

    MDRepo ReadTheDocs

    TravisWheelerLab/mdrepo-readthedocs's past year of commit activity
    0 0 0 0 Updated Sep 10, 2026
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