Enable memory-aware row tiling for GPU CD consensus refits - #10
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JerryIshihara wants to merge 2 commits into
Draft
Enable memory-aware row tiling for GPU CD consensus refits#10JerryIshihara wants to merge 2 commits into
JerryIshihara wants to merge 2 commits into
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JerryIshihara
marked this pull request as draft
August 17, 2026 06:13
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Summary
Adds row-wise tiling to the GPU coordinate-descent solver for the fixed-
Hrefits performed during cNMF consensus.This reduces peak GPU memory usage on large datasets while preserving CD numerical behavior and the existing consensus workflow.
Changes
update_H=False.Hfixed while updating usage matrixWin row batches.Hproducts across tiles.--gpu-row-tiling-ratio 0.5