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  1. LegNet LegNet Public

    accurate prediction of promoter activity and variant effects from massive parallel reporter assays

    Jupyter Notebook 46 3

  2. vigg_ribonanza vigg_ribonanza Public

    Source code of the Stanford Ribonanza RNA Folding first place solution

    Python 42 5

  3. MPRA-MNIST MPRA-MNIST Public

    MPRA-MNIST datasets

    Jupyter Notebook 20 3

  4. human_legnet human_legnet Public

    Python 18 2

  5. MixALime MixALime Public

    Mixture Models for Allelic Imbalance Estimation

    Python 11 1

  6. parade parade Public

    Jupyter Notebook 6 4

Repositories

Showing 10 of 54 repositories
  • MARADONER Public

    Motif Response Analysis Done Right

    autosome-ru/MARADONER's past year of commit activity
    Python 2 0 0 0 Updated Oct 7, 2026
  • MPRA-MNIST Public

    MPRA-MNIST datasets

    autosome-ru/MPRA-MNIST's past year of commit activity
    Jupyter Notebook 20 3 0 1 Updated Oct 6, 2026
  • ASB-backend Public
    autosome-ru/ASB-backend's past year of commit activity
    Python 0 1 0 8 Updated Oct 5, 2026
  • ArChIPelago Public

    ArChIPelago — the arrangement of multiple position weight matrices with ChIP-Seq and machine learning for prediction of transcription factor binding sites

    autosome-ru/ArChIPelago's past year of commit activity
    Roff 0 0 0 0 Updated Sep 29, 2026
  • autosome-ru/ArChIPelago-TFBS-finder's past year of commit activity
    Python 0 0 0 0 Updated Sep 29, 2026
  • ebin Public

    Normalization of MPRA data (FACS bins × replicates × sequences)

    autosome-ru/ebin's past year of commit activity
    Python 0 0 0 0 Updated Sep 22, 2026
  • hocomoco_webapp Public

    Web-site for HOCOMOCO collection of transcription factor binding sites motifs.

    autosome-ru/hocomoco_webapp's past year of commit activity
    Ruby 0 0 0 1 Updated Sep 22, 2026
  • opera_webface Public

    Webface for OperaHouse (included inside)

    autosome-ru/opera_webface's past year of commit activity
    Ruby 0 MIT 0 0 2 Updated Sep 22, 2026
  • epifactors_webapp Public

    Web-site for EpiFactors database of epigenetic factors, corresponding genes and products.

    autosome-ru/epifactors_webapp's past year of commit activity
    Ruby 0 1 0 2 Updated Sep 22, 2026
  • EPIC_scoring Public

    Public scoring system for EPIC competition submissions

    autosome-ru/EPIC_scoring's past year of commit activity
    Python 1 1 0 0 Updated Sep 15, 2026