Issues

• COCO integration plan

  Epicnew feature
  danforthcenter/plantcv#2058 · Filter by author joshqsumner opened on Oct 16, 2026
  1

• dual channel threshold options

  danforthcenter/plantcv#2042 · Filter by author joshqsumner opened on Oct 1, 2026
  

• Validate input directory for jupyterconfig

  enhancement
  Feature

  danforthcenter/plantcv#2038 · Filter by author joshqsumner opened on Sep 30, 2026
  

• within_frame and analyze.size

  danforthcenter/plantcv#2011 · Filter by author stiphyMT opened on Sep 17, 2026
  2

• listing available indices

  new feature
  danforthcenter/plantcv#2008 · Filter by author joshqsumner opened on Sep 11, 2026
  1

  

• segment_insertion_angle: angles desync from leaves when a leaf yields 0 or 2 insertion segments

  danforthcenter/plantcv#2002 · Filter by author musharna opened on Aug 31, 2026

• The "standard matrix" for Macbeth chart-style color cards varies by brand and year of purchase

  enhancementupdate
  Feature

  danforthcenter/plantcv#2000 · Filter by author NMiklave opened on Aug 27, 2026
  6

  

• New OJIP photosynthesis functions

  new feature
  Feature

  danforthcenter/plantcv#1983 · Filter by author kmurphy61 opened on Jul 28, 2026 · PlantCV v5.0
  

• New NPQ photosynthesis functions

  new feature
  Feature

  danforthcenter/plantcv#1981 · Filter by author kmurphy61 opened on Jul 28, 2026 · PlantCV v5.0
  

• Miscellaneous errors in Observation Traits Summary Table

  help wanted
  danforthcenter/plantcv#1970 · Filter by author hkmanching opened on Jul 15, 2026
  

• Docs restructuring for v5

  discussion
  danforthcenter/plantcv#1962 · Filter by author joshqsumner opened on Jul 1, 2026
  

• Color card detection polygon extending outside of ROI

  help wanted
  danforthcenter/plantcv#1950 · Filter by author joshqsumner opened on Jun 17, 2026 · PlantCV v5.0
  1

  

• Coco/Yolo annotation support

  new feature
  danforthcenter/plantcv#1937 · Filter by author joshqsumner opened on May 22, 2026
  

• Orientation aware longest axis

  new feature
  danforthcenter/plantcv#1936 · Filter by author joshqsumner opened on May 22, 2026
  

• Automate kmeans parameter search

  new feature
  danforthcenter/plantcv#1923 · Filter by author k034b363 opened on May 13, 2026

• Add ability to output ROIs or boundaries to a format suitable for ML models

  new feature
  danforthcenter/plantcv#1901 · Filter by author k034b363 opened on Apr 16, 2026

• Lighter test data

  danforthcenter/plantcv#1898 · Filter by author joshqsumner opened on Mar 27, 2026

• Informative docstrings for classes

  new feature
  danforthcenter/plantcv#1890 · Filter by author joshqsumner opened on Mar 11, 2026
  1

• Spot Sampling

  new feature
  Feature

  danforthcenter/plantcv#1863 · Filter by author joshqsumner opened on Jan 13, 2026 · PlantCV v5.0
  

• Coordinate data in morphology sub-package saved as text file

  new feature
  danforthcenter/plantcv#1857 · Filter by author HaleySchuhl opened on Dec 17, 2025

• Add copy button to code blocks within documentation

  documentationnew feature
  danforthcenter/plantcv#1805 · Filter by author HaleySchuhl opened on Sep 26, 2025

• Deprecate masked_img return from threshold.custom_range in v5.0

  cleanupupdate
  danforthcenter/plantcv#1767 · Filter by author HaleySchuhl opened on Aug 25, 2025

• Adapt patch_extract in train_kmeans.py to work with images with alpha channel

  new feature
  Task

  danforthcenter/plantcv#1749 · Filter by author ghost opened on Aug 6, 2025
  3

• Add the option to use real world units in some functions

  enhancement
  Feature

  danforthcenter/plantcv#1722 · Filter by author HaleySchuhl opened on Jun 20, 2025

• add capability to read in .czi image files

  new feature
  danforthcenter/plantcv#1685 · Filter by author annacasto opened on Mar 28, 2025