EMO BON
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MetaGOflow
MetaGOflow PublicForked from EBI-Metagenomics/pipeline-v5
MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project
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hackathon2022
hackathon2022 PublicTutorials and further material for the "Learning Data Management and Workflow Analyses: a hackathon from the EMBRC’s EMO BON (marine metagenomics) project" hackathon
Common Workflow Language
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governance-crate
governance-crate PublicHolds the governance content for the emo-bon data management
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sequencing-logistics-crate
sequencing-logistics-crate PublicThe files controlling and describing the sequencing metadata
R 2
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emobon-dm-tools
emobon-dm-tools PublicCollection of scripts and tricks that help automate collecting / formatting / checking the data from the observatories
Python
Repositories
- observatory-profile Public
Repository for the templates and additional metadata, that are used to semantically uplift emo-bon logsheet data into triples
- subsetted-distribution-creation-action Public
Github action reponsibe for creating subsetted distributions of emo-bon data that will be used to create artifacts. These distributions will be created and maintained to comply to different aggregators. In time this should not be needed due to radical transparency. But we don't live in an ideal world yet hence the need for this action.
- ns Public
- MetaGOflow Public Forked from EBI-Metagenomics/pipeline-v5
MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project
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