scAB detects multiresolution cell states with clinical significance by integrating single-cell genomics and bulk sequencing data

Installation

scAB R package can be easily installed from Github using devtools:

devtools::install_github("jinworks/scAB")

Installation of other dependencies if not automatically installed

• Install Seurat using install.packages('Seurat').
• Install diptest using install.packages('diptest').
• Install multimode using install.packages('multimode').
• Install preprocessCore using if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager"); BiocManager::install("preprocessCore").