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@rat-genome-database

Rat Genome Database

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  1. rgd-core-library rgd-core-library Public

    Domain layer and shared components

    Java

  2. rgd-web-application rgd-web-application Public

    Code used by the RGD web site and tools

    JavaScript 2

  3. rgd-web-services rgd-web-services Public

    Swagger implementation

    Java

  4. rgd-annotation-files rgd-annotation-files Public

    GO annotation files in GAF, GPAD and GPI format

Repositories

Showing 10 of 157 repositories
  • rgd-core-library Public

    Domain layer and shared components

    rat-genome-database/rgd-core-library's past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Sep 29, 2026
  • RDO-Disease-Ontology Public
    rat-genome-database/RDO-Disease-Ontology's past year of commit activity
    0 0 1 0 Updated Sep 29, 2026
  • RS-Rat-Strain-Ontology Public

    Rat strain ontology maintained by RGD

    rat-genome-database/RS-Rat-Strain-Ontology's past year of commit activity
    0 2 0 1 Updated Sep 29, 2026
  • XCO-Experimental-Condition-Ontology Public

    Experimental Condition Ontology maintained by RGD

    rat-genome-database/XCO-Experimental-Condition-Ontology's past year of commit activity
    2 2 0 1 Updated Sep 29, 2026
  • MMO-Measurement-Method-Ontology Public

    Measurement method ontology maintained by RGD

    rat-genome-database/MMO-Measurement-Method-Ontology's past year of commit activity
    1 2 0 1 Updated Sep 29, 2026
  • CMO-Clinical-Measurement-Ontology Public

    Clinical Measurement Ontology (CMO) maintained by RGD

    rat-genome-database/CMO-Clinical-Measurement-Ontology's past year of commit activity
    3 4 7 2 Updated Sep 29, 2026
  • OntomateAIPipeline Public

    Ontomate AI Pipeline

    rat-genome-database/OntomateAIPipeline's past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Sep 29, 2026
  • gff3-pipeline Public

    Creates gff3 files to be loaded into RGD JBrowse instance.

    rat-genome-database/gff3-pipeline's past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Sep 29, 2026
  • rgd-ai-chatbot Public

    A Spring Boot application using OpenAI embeddings and PostgreSQL vector store for efficient document retrieval and question answering through RAG (Retrieval Augmented Generation). Enables document uploads, semantic search, and context-aware responses.

    rat-genome-database/rgd-ai-chatbot's past year of commit activity
    0 GPL-3.0 0 0 0 Updated Sep 28, 2026
  • alliance-submission-pipeline Public

    Generate and submit files for rat and human to the Alliance (https://www.alliancegenome.org/)

    rat-genome-database/alliance-submission-pipeline's past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Sep 28, 2026
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