Alignment-free bacterial identification and classification in metagenomics sequencing data using machine learning
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Updated
May 19, 2025 - Python
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bacteria-classification
Here are 5 public repositories matching this topic...
OptTaxPro: Optimized Taxonomic Profiling of microbiome using full-length 16S rRNA sequences
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May 3, 2025 - Python
A machine learning pipeline to classify bacterial species (Staphylococcus, Pseudomonas) from Surface-Enhanced Raman Spectroscopy (SERS) data using Python, Scikit-learn, and a Random Forest model.
random-forest-classifier staphylococcus-aureus bacteria-classification pseudomonas surface-enhanced-raman-spectroscopy
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Jun 16, 2026 - Jupyter Notebook
A resnet50 bacterial genus/strain classifier from the dibas dataset.
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Nov 5, 2022 - Jupyter Notebook
BacteriaCV - Dataset preparation pipeline for DIBaS bacterial microscopy images with species mapping, leakage-safe 70/20/10 splits, and five-fold training folds.
computer-science unit-testing computer-vision deep-learning reproducible-research pytorch medical-imaging feature-extraction image-classification resnet microbiology transfer-learning academic-project skripsi data-pipeline multi-task-learning undergraduate-thesis fastapi bacteria-classification gram-staining
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Oct 8, 2026 - Python
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