beacon-v2

A software toolkit for the interconversion of standard data models for phenotypic data

Pheno-Ranker is a tool for comparing phenotypic data structured in JSON/YAML format, such as Beacon v2 Models or Phenopackets v2, as well as CSV.

Beacon v2 Reference Implementation (Data ingestion tools)

Beacon v2 - CNAG Biomedical Informatics - Tools (Data ingestion tools)

The web ui (R-Shiny application) for Pheno-Ranker, a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2

A standalone GDI node: a GA4GH Beacon v2.2.0 and a FAIR Data Point in one Rust binary with no database, plus the provider-side dataset tool. Aggregate allele frequencies only. Unsupported, published as-is.

Turn a VCF file into a running GA4GH Beacon v2 REST API, with no database and no ingestion step