[Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'.
A curated list of biomedical knowledge graphs and of resources for their construction.
Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs
"Modeling electronic health record data using an end-to-end knowledge-graph-informed topic model" paper on Sci Rep (2022)
Knowledge graph workflows with Python.
Disease Intelligence. Connected. Open-source research software for connecting disease knowledge, evidence, and provenance across biomedical sources.
Graph construction strategies for drug-disease indication ranking on biomedical knowledge graphs.
Knowledge graph workflows with Python.
India's biomedical intelligence platform — multi-hop reasoning over 4.3M-edge KG with Indian population genomics, Ayurvedic compounds, and clinical trial data
JBI-specific code, frozen protocol, and derived results for an externally validated biomedical knowledge-graph reliability audit
FAIR knowledge graph for lipoprotein metabolism — 6,214 core nodes / 36,568 edges (7 node and 7 relationship types); 6,639 / 41,497 with the extended schema. Lipoprotein particles as first-class entities; deposited at Zenodo 10.5281/zenodo.23080346.
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