ht-selex

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Here are 3 public repositories matching this topic...

drivenbyentropy / aptasuite

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A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments.

Updated Apr 14, 2023
Java

hmdlab / RaptQA

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RaptQA: reproducible HT-SELEX RNA aptamer design with multi-temperature RBMs, QUBO export, and annealing workflows.

bioinformatics deep-learning reproducible-research computational-biology pytorch drug-discovery rna rbm generative-models quantum-annealing ht-selex annealing selex research-software qubo aptamer rna-aptamers aptamer-design rna-drug-discovery

Updated Aug 12, 2026
Python

Qasim-Hussain-Code / aptamer_selex_generative_design_pipeline

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Family-held-out aptamer benchmark on two public HT-SELEX datasets, with experimental discrimination, a Markov generation baseline, and canonical-RNA structure ablation.

python bash benchmark machine-learning bioinformatics computational-biology rna reproducibility secondary-structure nucleic-acids sequence-analysis viennarna ht-selex selex aptamer

Updated Oct 8, 2026
Python

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