Probe and cluster antibody paratopes and clonotypes
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Updated
Oct 2, 2023 - Python
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paratope
Here are 3 public repositories matching this topic...
Structural bioinformatics pipeline for clustering antibody-antigen epitopes by geometric similarity and deriving consensus paratope design constraints for antibody engineering.
clustering protein-design structural-bioinformatics immunoinformatics antibodies protein-engineering pyrosetta epitope paratope sabdab
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Sep 27, 2026 - Python
Group antibodies by the binding site they present, not by sequence. Predicts which CDR residues actually contact antigen, then clusters antibodies on those residues to surface clonally unrelated antibodies that converged on the same binding mode
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Sep 30, 2026 - TypeScript
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