CellNet: network biology applied to stem cell engineering
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May 8, 2023 - R
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stem-cell-differentiation
Here are 8 public repositories matching this topic...
Reconstruction of complex single-cell trajectories using CellRouter
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Dec 14, 2018 - R
Code for publication: Hypergraph Geometry Reflects Higher-Order Dynamics in Protein Interaction Networks; Kevin A. Murgas, Emil Saucan, Romeil Sandhu; Scientific Reports (2022)
cancer network-analysis hypergraph discrete-geometry stem-cell-differentiation protein-protein-interaction-network forman-curvature
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Oct 8, 2022 - MATLAB
CellDreamer: World Models for Stem Cell Differentiation
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Jan 28, 2026 - TypeScript
Evaluating adipocyte differentiation of bone marrow-derived mesenchymal stem cells by a deep learning method for automatic lipid droplet counting
lasagne theano regression stem-cell-differentiation counting-objects microscopic-images lipid-droplets
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Nov 26, 2022 - Python
Ferroptosis and antioxidant effect on stem cells
stem-cell-differentiation antioxidants time-dependent volcano-plot differential-expression-analyses r-software deseq2-analysis ferroptosis
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Apr 12, 2025 - R
Reproducing ChIPDiff’s hidden Markov model to identify changes in H3K27me3 during the differentiation of mouse embryonic stem cells into neural progenitor cells
bioinformatics hidden-markov-model stem-cell-differentiation chip-seq-analysis neurodevelopment epigenetics-data h3k27me3 neural-progenitor-cells
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Sep 10, 2026 - Python
Lab website.
bioinformatics genomics cancer computational-biology cancer-genomics developmental-biology stem-cell-differentiation
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Sep 2, 2026 - Python
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